SOTNIR handbook

Getting started

  • Linux Workstations
  • Unix Basics

Undertaking a Neuroimaging Project in Southampton

  • Trainings and Certifications
  • Research MRI Scanners
  • High Performance Computing
  • Cloud Computing

File conversion

  • Convert from DICOM to NIfTI
  • Pseudonymise your dataset

Sharing Neuroimaging Data

  • Brain Imaging Data Structure (BIDS)
  • DataLad: Distributed Data Management

functional MRI

  • Nordic Neuro Lab (NNL)
  • PsychoPy
  • fMRI Analysis

diffusion MRI

  • dMRI Analysis

Quantitative Susceptibility Mapping

  • QSM Analysis
SOTNIR handbook
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© Copyright 2021, Huneke NTM, Varatharaj A, Zou K.

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